Overlay Community Blobs on a Network Plot — overlay

Render a network with splot and overlay smooth blob shapes highlighting node communities.

Usage

overlay_communities(
  x,
  communities,
  blob_colors = NULL,
  blob_alpha = 0.25,
  blob_linewidth = 0.7,
  blob_line_alpha = 0.8,
  ...
)

Arguments

x: A network object passed to splot: tna, matrix, igraph, or cograph_network.
communities: Community assignments in any format: a method name (e.g., "walktrap", "louvain"), a numeric membership vector (e.g., c(1, 1, 2, 2, 3)), a named list of character vectors, a cograph_communities object, or a tna_communities object.
blob_colors: Character vector of fill colors for blobs. Recycled if shorter than the number of communities.
blob_alpha: Numeric. Fill transparency (0-1).
blob_linewidth: Numeric. Border line width.
blob_line_alpha: Numeric. Border line transparency (0-1).
...: Additional arguments passed to splot.

Value

The splot result (invisibly).

Examples

set.seed(1)
mat <- matrix(runif(25), 5, 5,
              dimnames = list(LETTERS[1:5], LETTERS[1:5]))
diag(mat) <- 0
overlay_communities(mat, list(g1 = c("A","B"), g2 = c("C","D","E")))


model <- tna::tna(tna::group_regulation)
comm <- cograph::communities(model$weights, method = "infomap")
overlay_communities(model, comm)