Plot a Complete VaSSTra Analysis — plot.vasstra • VaSSTra

Plot a Complete VaSSTra Analysis

Usage

# S3 method for class 'vasstra'
plot(x, which = c("trajectories", "states", "sequences"), ...)

Arguments

x: A vasstra object.
which: One of "trajectories", "states", or "sequences".
...: Passed to the selected step's plot method. Sequence and trajectory plots are rendered by Nestimate. For the trajectory step, type accepts a vector of views (e.g. type = c("transition", "index", "distribution")) to draw a grid with one row per trajectory; see plot.vasstra_trajectories().

Value

The selected plot method's invisible result.

Examples

data("engagement", package = "VaSSTra")
fit <- vasstra(engagement, n_states = 3, n_trajectories = 3)
plot(fit)

plot(fit, which = "states", type = "profile")

plot(fit, which = "sequences")

# \donttest{
if (requireNamespace("cograph", quietly = TRUE)) {
  plot(fit, type = c("transition", "index", "distribution"))
}

# }