
Bootstrap Cliques of Transition Networks from Sequence Data
Source:R/bootstrap.R
bootstrap_cliques.RdBootstrap Cliques of Transition Networks from Sequence Data
Usage
bootstrap_cliques(x, size, threshold, iter, level, consistency_range)
# S3 method for class 'tna'
bootstrap_cliques(
x,
size = 2L,
threshold = 0,
iter = 1000,
level = 0.05,
consistency_range = c(0.75, 1.25)
)Arguments
- x
A
tnaor agroup_tnaobject.- size
An
integerspecifying the size of the cliques to identify. Defaults to2(dyads).- threshold
A
numericvalue that sets the minimum edge weight for an edge to be considered in the clique. Edges below this value are ignored. Defaults to0.- iter
An
integerspecifying the number of bootstrap samples to draw. Defaults to1000.- level
A
numericvalue representing the significance level for hypothesis testing and confidence intervals. Defaults to0.05.- consistency_range
A
numericvector of length 2. Determines how much the edge weights may deviate (multiplicatively) from their observed values (below and above) before they are considered insignificant. The default isc(0.75, 1.25)which corresponds to a symmetric 25% deviation range. Used only whenmethod = "stability".